| available.genomes | Find available/installed genomes | 
| bsapply | bsapply | 
| BSgenome-class | BSgenome objects | 
| BSgenomeForge | The BSgenomeForge functions | 
| BSgenome-utils | BSgenome utilities | 
| BSgenomeViews-class | BSgenomeViews objects | 
| BSParams-class | Class "BSParams" | 
| export-methods | Export a BSgenome object as a FASTA or twoBit file | 
| getSeq-methods | getSeq methods for BSgenome and XStringSet objects | 
| injectSNPs | SNP injection | 
| SNPlocs-class | SNPlocs objects | 
| XtraSNPlocs-class | XtraSNPlocs objects | 
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