| available.genomes | Find available/installed genomes |
| bsapply | bsapply |
| BSgenome-class | BSgenome objects |
| BSgenomeForge | The BSgenomeForge functions |
| BSgenome-utils | BSgenome utilities |
| BSgenomeViews-class | BSgenomeViews objects |
| BSParams-class | Class "BSParams" |
| export-methods | Export a BSgenome object as a FASTA or twoBit file |
| getSeq-methods | getSeq methods for BSgenome and XStringSet objects |
| injectSNPs | SNP injection |
| SNPlocs-class | SNPlocs objects |
| XtraSNPlocs-class | XtraSNPlocs objects |
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