Man pages for CAMTHC
Convex Analysis of Mixtures for Tissue Heterogeneity Characterization
| AfromMarkers | Proportion matrix estimation from marker genes |
| AS-accessor | Deconvoluted matrix accessors |
| CAM | Convex Analysis of Mixtures |
| CAMASest | A and S matrix estimation by CAM |
| CAMASObj-class | Class "CAMASObj" |
| CAMMGCluster | MG cluster detection for CAM |
| CAMMGObj-class | Class "CAMMGObj" |
| CAMObj-class | Class "CAMObj" |
| CAMPrep | Data preprocessing for CAM |
| CAMPrepObj-class | Class "CAMPrepObj" |
| CAMTHC-package | CAMTHC: A package for Tissue Heterogeneity Characterization. |
| cornerSort | Candidate combinations as corners |
| MDL | Minimum Description Length |
| MDLObj-class | Class "MDLObj" |
| MGsforA | Marker genes detected by CAM for estimating A |
| MGstatistic | Statistics for ranking marker genes |
| PCAmat | Dimension-reduction loading matrix accessor |
| ratMix3 | Gene expression data downsampled from GSE19380 |
| redoASest | Re-estimate A, S matrix |
| reselectMG | Reselect markers by thresholding |
| sffsHull | Sequential Forward Floating Selection (SFFS) to approximate... |
| simplexplot | The plot of scatter simplex |
| XWProj | Perspective projection to obtain simplex |
