CCPROMISE: PROMISE analysis with Canonical Correlation for Two Forms of High Dimensional Genetic Data

Perform Canonical correlation between two forms of high demensional genetic data, and associate the first compoent of each form of data with a specific biologically interesting pattern of associations with multiple endpoints. A probe level analysis is also implemented.

Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("CCPROMISE")
AuthorXueyuan Cao <xueyuan.cao@stjude.org> and Stanley.pounds <stanley.pounds@stjude.org>
Bioconductor views GeneExpression Microarray
Date of publicationNone
MaintainerXueyuan Cao <xueyuan.cao@stjude.org>
LicenseGPL (>= 2)
Version1.0.0

View on Bioconductor

Files

DESCRIPTION
NAMESPACE
R
R/CANN.R R/CCPROMISE.R R/PROMISE2.R R/PrbCor.R R/PrbPROMISE.R R/datSel.R
build
build/vignette.rds
data
data/exmplESet.rda
data/exmplGeneSet.rda
data/exmplMSet.rda
data/exmplPat.rda
inst
inst/doc
inst/doc/CCPROMISE.R
inst/doc/CCPROMISE.Rnw
inst/doc/CCPROMISE.pdf
man
man/CANN.Rd man/CCPROMISE-package.Rd man/CCPROMISE.Rd man/PROMISE2.Rd man/PrbCor.Rd man/PrbPROMISE.Rd man/exmplESet.Rd man/exmplGeneSet.Rd man/exmplMSet.Rd man/exmplPat.Rd
vignettes
vignettes/CCPROMISE.Rnw

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