Files in CNVfilteR
Identifies false positives of CNV calling tools by using SNV calls

NEWS

NAMESPACE

DESCRIPTION

R/plotVariantsForCNV.R R/loadSNPsFromVCF.R R/plotScoringModel.R R/loadCNVcalls.R R/plotAllCNVs.R R/loadVCFs.R R/filterCNVs.R R/getVariantScore.R R/utils.R inst/doc/CNVfilteR.Rmd inst/doc/CNVfilteR.R

inst/doc/CNVfilteR.html

inst/extdata/DECoN.CNVcalls.csv

inst/extdata/variants.sample2.vcf.gz

inst/extdata/variants.sample1.vcf.gz.tbi

inst/extdata/DECoN.CNVcalls.2.csv

inst/extdata/variants.sample1.vcf.gz

inst/extdata/variants.sample3.vcf

build/vignette.rds

vignettes/CNVfilteR.Rmd man/filterCNVs.Rd man/auxGetVcfSource.Rd man/plotVariantsForCNV.Rd man/auxAddCNcolumn.Rd man/loadSNPsFromVCF.Rd man/plotScoringModel.Rd man/plotAllCNVs.Rd man/getVariantScore.Rd man/loadVCFs.Rd man/loadCNVcalls.Rd man/auxProcessVariants.Rd

CNVfilteR documentation built on April 17, 2021, 6:06 p.m.

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