connections: Database Connections
In ChemmineR: Cheminformatics Toolkit for R
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Get a connection to one of the pre-build compound databases.
The DrugBank database is distributed in the ChemmineDrugs package.
The DUD database will be downloaded the first time it is called.
It will download a 1.8GB zipped file which will expand to abut 9GB.
A directory to store the database in can be passed to the DUD() function.
Usage
1
2
3
Arguments
destinationDir
The directory to store the downloaded DUD database in.
Value
A connection object to the ether the DUD or DrugBank database.
This object must be passed to other functions which make use of the connection.
Author(s)
Kevin Horan
Examples
1
dbConn = DrugBank()
ChemmineR documentation built on Feb. 28, 2021, 2:02 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
Get a connection to one of the pre-build compound databases. The DrugBank database is distributed in the ChemmineDrugs package.
The DUD database will be downloaded the first time it is called.
It will download a 1.8GB zipped file which will expand to abut 9GB.
A directory to store the database in can be passed to the DUD() function.
Usage
1 2 3 |
Arguments
destinationDir |
The directory to store the downloaded DUD database in. |
Value
A connection object to the ether the DUD or DrugBank database. This object must be passed to other functions which make use of the connection.
Author(s)
Kevin Horan
Examples
1 | dbConn = DrugBank()
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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