ODToFluxBounds: ODToFluxBounds
In CoRegFlux: CoRegFlux
Description
Usage
Arguments
Value
Description
ODToFluxBounds
Usage
1
2
ODToFluxBounds(odRate, model, metabolites_rates = NULL,
biomass_flux_index = get_biomass_flux_position(model))
Arguments
odRate
The values of OD measured over time
model
An object of class modelOrg, the metabolic model.
metabolites_rates
A data.frame containing the extraneous metabolites,
their initial concentrations and their uptake rates. Columns must be named
"names","concentrations" and "rates".
biomass_flux_index
Optional. index of the flux corresponding to the
biomass reaction.
Value
Flux bounds from OD
CoRegFlux documentation built on Nov. 8, 2020, 5:21 p.m.
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Description Usage Arguments Value
Description
ODToFluxBounds
Usage
1 2 | ODToFluxBounds(odRate, model, metabolites_rates = NULL,
biomass_flux_index = get_biomass_flux_position(model))
|
Arguments
odRate |
The values of OD measured over time |
model |
An object of class modelOrg, the metabolic model. |
metabolites_rates |
A data.frame containing the extraneous metabolites, their initial concentrations and their uptake rates. Columns must be named "names","concentrations" and "rates". |
biomass_flux_index |
Optional. index of the flux corresponding to the biomass reaction. |
Value
Flux bounds from OD
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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