API for DEGseq
Identify Differentially Expressed Genes from RNA-seq data
| Global functions | |
|---|---|
| Check_TR | Source code |
| DEGexp | Man page Source code |
| DEGexp2 | Man page Source code |
| DEGexp3 | Source code |
| DEGseq | Man page Source code |
| DEV_OFF | Source code Source code |
| FindDiff_CTR | Source code |
| FindDiff_FC | Source code |
| FindDiff_FET | Source code |
| FindDiff_LRT | Source code |
| FindDiff_MARS | Source code |
| FindDiff_SD | Source code |
| GeneExpExample1000 | Man page |
| GeneExpExample5000 | Man page |
| GetMeanAndSD | Source code |
| LineOnPlot | Source code |
| Norm2Result | Source code |
| Pair2Norm | Source code |
| ReadLane | Source code |
| ReadLane2 | Source code |
| addLines | Source code |
| addPoints | Source code |
| addText | Source code |
| cbind.PairNorm | Source code |
| cbind.lanePair | Source code |
| cbind.laneRaw | Source code |
| cbind2laneRaw | Source code |
| getExonAnnotationFile | Source code |
| getGeneExp | Man page Source code |
| getPQvalue | Source code |
| getPairs | Source code |
| getQvalue1 | Source code |
| getQvalue2 | Source code |
| kidneyChr21.bed | Man page |
| kidneyChr21Bowtie | Man page |
| liverChr21.bed | Man page |
| liverChr21Bowtie | Man page |
| maBoxplot | Source code |
| maCompNormA | Source code |
| maCompNormEq | Source code |
| maDefaultPar | Source code |
| maDotsDefaults | Source code |
| maDotsMatch | Source code |
| maLegendLines | Source code |
| maLoessLines | Source code |
| maLowessLines | Source code |
| maMed | Source code |
| maMedLines | Source code |
| maNorm | Source code |
| maNormLoess | Source code |
| maNormMain | Source code |
| maNormMed | Source code |
| maNum2Logic | Source code |
| maPlot | Source code |
| maPlot.func | Source code |
| open_html | Source code |
| output_FC | Source code |
| output_FET | Source code |
| output_LRT | Source code |
| output_SD | Source code |
| plot.PairResult | Source code |
| png_new | Source code |
| readGeneExp | Man page Source code |
| refFlatChr21 | Man page |
