St-methods: Method Fixed window size scan for a sequence of window sizes
In DMRScan: Detection of Differentially Methylated Regions
Description
Usage
Arguments
Value
Examples
Description
Method Fixed window size scan for a sequence of window sizes
Usage
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manyWindowSizeScanner(region, windowThreshold, windowSize)
## S4 method for signature 'GRangesList'
manyWindowSizeScanner(region, windowThreshold,
windowSize)
## S4 method for signature 'GRanges'
manyWindowSizeScanner(region, windowThreshold,
windowSize)
Arguments
region
Object of type GRanges
windowThreshold
Vector of window thresholds
windowSize
Vector of window sizes to be tested on regions
Value
A list of the windows that are significant
Examples
1
## Not run
DMRScan documentation built on Nov. 8, 2020, 8:10 p.m.
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Description Usage Arguments Value Examples
Description
Method Fixed window size scan for a sequence of window sizes
Usage
1 2 3 4 5 6 7 8 9 | manyWindowSizeScanner(region, windowThreshold, windowSize)
## S4 method for signature 'GRangesList'
manyWindowSizeScanner(region, windowThreshold,
windowSize)
## S4 method for signature 'GRanges'
manyWindowSizeScanner(region, windowThreshold,
windowSize)
|
Arguments
region |
Object of type GRanges |
windowThreshold |
Vector of window thresholds |
windowSize |
Vector of window sizes to be tested on regions |
Value
A list of the windows that are significant
Examples
1 | ## Not run
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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