DeMixT: Cell type-specific deconvolution of heterogeneous tumor samples with two or three components using expression data from RNAseq or microarray platforms

DeMixT is a software package that performs deconvolution on transcriptome data from a mixture of two or three components.

Package details

AuthorZeya Wang <[email protected]>, Shaolong Cao<[email protected]>, Wenyi Wang <[email protected]@mdanderson.org>
Bioconductor views Classification Coverage GeneExpression Microarray Sequencing Software StatisticalMethod TissueMicroarray
MaintainerShaolong Cao<[email protected]>, Peng Yang <[email protected]>
LicenseGPL-3
Version1.2.5
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("DeMixT")

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DeMixT documentation built on Feb. 18, 2020, 2 a.m.