Director: A dynamic visualization tool of multi-level data
Version 1.2.0

Director is an R package designed to streamline the visualization of molecular effects in regulatory cascades. It utilizes the R package htmltools and a modified Sankey plugin of the JavaScript library D3 to provide a fast and easy, browser-enabled solution to discovering potentially interesting downstream effects of regulatory and/or co-expressed molecules. The diagrams are robust, interactive, and packaged as highly-portable HTML files that eliminate the need for third-party software to view. This enables a straightforward approach for scientists to interpret the data produced, and bioinformatics developers an alternative means to present relevant data.

AuthorKatherine Icay [aut, cre]
Bioconductor views Visualization
Date of publicationNone
MaintainerKatherine Icay <katherine.icay@helsinki.fi>
LicenseGPL-3 + file LICENSE
Version1.2.0
URL https://github.com/kzouchka/Director
Package repositoryView on Bioconductor
InstallationInstall the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("Director")

Getting started

README.md

Popular man pages

drawSankey: drawSankey
filterNumeric: filterNumeric
filterSubset: filterSubset
initSankey: initSankey
mesenchymal: Analysis results of Yang et al.'s (2013) master microRNA...
poorprog: Analysis results for poor prognosis serous ovarian cancer
writeSankey: writeSankey
See all...

All man pages Function index File listing

Man pages

append2List: append2List
createList: createList
drawSankey: drawSankey
filterNumeric: filterNumeric
filterRelation: filterRelation
filterSubset: filterSubset
initSankey: initSankey
makeSankey: makeSankey
mesenchymal: Analysis results of Yang et al.'s (2013) master microRNA...
poorprog: Analysis results for poor prognosis serous ovarian cancer
writeSankey: writeSankey

Functions

Files

DESCRIPTION
LICENSE
NAMESPACE
R
R/data.R
R/functions.R
README.md
build
build/vignette.rds
data
data/ovca.rda
inst
inst/NEWS
inst/doc
inst/doc/vignette.R
inst/doc/vignette.Rnw
inst/doc/vignette.pdf
inst/www
inst/www/css
inst/www/css/sankey.css
inst/www/js
inst/www/js/LICENSE
inst/www/js/d3.min.js
inst/www/js/d3.v3.js
inst/www/js/sankey.js
inst/www/layouts
inst/www/layouts/sankey.html
inst/www/sankey-binding.js
man
man/append2List.Rd
man/createList.Rd
man/drawSankey.Rd
man/filterNumeric.Rd
man/filterRelation.Rd
man/filterSubset.Rd
man/initSankey.Rd
man/makeSankey.Rd
man/mesenchymal.Rd
man/poorprog.Rd
man/writeSankey.Rd
vignettes
vignettes/figure1.png
vignettes/figure2.png
vignettes/figure3.png
vignettes/figure4.png
vignettes/vignette.Rnw
Director documentation built on May 20, 2017, 10:15 p.m.

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