API for DrugVsDisease
Comparison of disease and drug profiles using Gene set Enrichment Analysis
| Global functions | |
|---|---|
| .KS.drug.disease | Source code |
| .WSR | Source code |
| .averagecluster | Source code |
| .calculateES | Source code |
| .classifyaveragelinkage | Source code |
| .classifysinglelinkage | Source code |
| .combineEnsembl | Source code |
| .combined | Source code |
| .combinemed | Source code |
| .convertEnsembl | Source code |
| .datafromAE | Source code |
| .datafromGEO | Source code |
| .findCluster | Source code |
| .findSignifCompounds | Source code |
| .fitlms | Source code |
| .getESscores | Source code |
| .matrixVar | Source code |
| .maxvar | Source code |
| .mrs | Source code |
| .multcontrast | Source code |
| .norm_mrs | Source code |
| .normalisedata | Source code |
| .processplatforms | Source code |
| .ptog | Source code |
| .ranknamemat | Source code |
| .readlocalAE | Source code |
| .readlocalCEL | Source code |
| .significantES | Source code |
| .singlecontrast | Source code |
| .treatmentonlyfit | Source code |
| .writecytoscape | Source code |
| DrugVsDisease | Man page |
| DrugVsDisease-package | Man page |
| classifyprofile | Man page Source code |
| combineProfiles | Man page Source code |
| convertProbes | Source code |
| customClust | Man page |
| customDB | Man page |
| customedge | Man page |
| customsif | Man page |
| generateprofiles | Man page Source code |
| profiles | Man page |
| selectrankedlists | Man page Source code |
| selprofile | Man page |
