Files in EpiTxDb

Storing and accessing epitranscriptomic information using the AnnotationDbi interface

_pkgdown.yml

NEWS

README.md

NAMESPACE

codecov.yml

DESCRIPTION

R/EpiTxDb-class.R R/makeEpiTxDbFromRMBase.R R/makeEpiTxDb.R R/AllGenerics.R R/modifications.R R/ranges-helpers.R R/shiftGenomicToTranscript.R R/modificationsBy.R R/makeEpiTxDbFromGRanges.R R/EpiTxDb-schema.R R/makeEpiTxDbFromtRNAdb.R R/select-methods.R R/EpiTxDb-SELECT-helpers.R R/EpiTxDb.R

inst/CITATION

inst/doc/EpiTxDb.html

inst/doc/EpiTxDb-creation.Rmd inst/doc/EpiTxDb-creation.R inst/doc/EpiTxDb.Rmd

inst/doc/EpiTxDb-creation.html

inst/doc/EpiTxDb.R

inst/extdata/EpiTxDb.Hs.hg38.snoRNAdb.sqlite

build/vignette.rds

tests/testthat.R tests/testthat/test-4makeEpiTxDbFromRMBase.R tests/testthat/test-4makeEpiTxDbFromGRanges.R tests/testthat/test-0select.R tests/testthat/test-0EpiTxDb.R tests/testthat/test-1ranges-helpers.R tests/testthat/test-3modifications.R tests/testthat/test-5shiftGenomicToTranscript.R tests/testthat/test-2makeEpiTxDb.R tests/testthat/test-4makeEpiTxDbFromtRNAdb.R vignettes/EpiTxDb-creation.Rmd

vignettes/references.bib

vignettes/EpiTxDb.Rmd

data/rmbase_data.rda

man/EpiTxDb-package.Rd man/EpiTxDb-data.Rd man/makeEpiTxDbFromRMBase.Rd man/makeEpiTxDb.Rd man/makeEpiTxDbFromGRanges.Rd man/rescale.Rd man/modifications.Rd man/shiftGenomicToTranscript.Rd man/select.Rd man/EpiTxDb-class.Rd man/makeEpiTxDbFromtRNAdb.Rd man/positionSequence.Rd

EpiTxDb documentation built on March 26, 2021, 6 p.m.