app: Open web application
In GA4GHshiny: Shiny application for interacting with GA4GH-based data servers

Description Usage Arguments Details Value Examples

View source: R/app.R

Web application for interacting with GA4GH API data servers.

1 2	app(host, orgDb = NA_character_, txDb = NA_character_, serverName = "GA4GHshiny")

`host`	Character vector of an URL of GA4GH API data server endpoint.
`orgDb`	character vector of an org.Db package.
`txDb`	character vector of a TxDb package.
`serverName`	character vector of the server name. Default: GA4GHshiny.

This application is dependent of which data the server provides trough GA4GH API. If some of tables or graphic charts not appear, the server connected may not provide the necessary data. For example, INFO data.

Shiny application object.

if (interactive()) {
  library(org.Hs.eg.db)
  library(TxDb.Hsapiens.UCSC.hg19.knownGene)
  app("http://1kgenomes.ga4gh.org/", orgDb = "org.Hs.eg.db",
    txDb = "TxDb.Hsapiens.UCSC.hg19.knownGene")
}