GEOsubmission: Prepares microarray data for submission to GEO

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Helps to easily submit a microarray dataset and the associated sample information to GEO by preparing a single file for upload (direct deposit).

Author
Alexandre Kuhn <alexandre.m.kuhn@gmail.com>
Date of publication
None
Maintainer
Alexandre Kuhn <alexandre.m.kuhn@gmail.com>
License
GPL (>= 2)
Version
1.26.0

View on Bioconductor

Man pages

expresssionNormalized
expressionNormalized.txt
microarray2soft
Prepares microarray data for submission to GEO
sample1
sample1.CEL
sample2
sample2.CEL
sampleInfo
sampleInfo.txt
seriesInfo
seriesInfo.txt

Files in this package

GEOsubmission/DESCRIPTION
GEOsubmission/NAMESPACE
GEOsubmission/R
GEOsubmission/R/microarray2soft.R
GEOsubmission/R/zzz.R
GEOsubmission/build
GEOsubmission/build/vignette.rds
GEOsubmission/inst
GEOsubmission/inst/doc
GEOsubmission/inst/doc/GEOsubmission.R
GEOsubmission/inst/doc/GEOsubmission.Rnw
GEOsubmission/inst/doc/GEOsubmission.pdf
GEOsubmission/inst/extdata
GEOsubmission/inst/extdata/expressionNormalized.txt
GEOsubmission/inst/extdata/sample1.CEL
GEOsubmission/inst/extdata/sample2.CEL
GEOsubmission/inst/extdata/sampleInfo.txt
GEOsubmission/inst/extdata/seriesInfo.txt
GEOsubmission/man
GEOsubmission/man/expresssionNormalized.Rd
GEOsubmission/man/microarray2soft.Rd
GEOsubmission/man/sample1.Rd
GEOsubmission/man/sample2.Rd
GEOsubmission/man/sampleInfo.Rd
GEOsubmission/man/seriesInfo.Rd
GEOsubmission/vignettes
GEOsubmission/vignettes/GEOsubmission.Rnw
GEOsubmission/vignettes/GEOsubmission.bib