GSCA: GSCA: Gene Set Context Analysis

GSCA takes as input several lists of activated and repressed genes. GSCA then searches through a compendium of publicly available gene expression profiles for biological contexts that are enriched with a specified pattern of gene expression. GSCA provides both traditional R functions and interactive, user-friendly user interface.

Package details

AuthorZhicheng Ji, Hongkai Ji
Bioconductor views GUI GeneExpression Visualization
MaintainerZhicheng Ji <[email protected]>
Package repositoryView on Bioconductor
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GSCA documentation built on Nov. 1, 2018, 2:09 a.m.