GSCA: GSCA: Gene Set Context Analysis

GSCA takes as input several lists of activated and repressed genes. GSCA then searches through a compendium of publicly available gene expression profiles for biological contexts that are enriched with a specified pattern of gene expression. GSCA provides both traditional R functions and interactive, user-friendly user interface.

Package details

AuthorZhicheng Ji, Hongkai Ji
Bioconductor views GUI GeneExpression Visualization
MaintainerZhicheng Ji <>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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GSCA documentation built on Nov. 8, 2020, 8:02 p.m.