response: Fetch 'GDCQuery' metadata from GDC

In GenomicDataCommons: NIH / NCI Genomic Data Commons Access

Description

Fetch GDCQuery metadata from GDC

Usage

response(x, ...)

## S3 method for class 'GDCQuery'
response(x, from = 0, size = 10, ...,
  response_handler = jsonlite::fromJSON)

response_all(x, ...)

Arguments

x	a GDCQuery object
...	passed to httr (good for passing config info, etc.)
from	integer index from which to start returning data
size	number of records to return
response_handler	a function that processes JSON (as text) and returns an R object. Default is fromJSON.

Value

A GDCResponse object which is a list with the following members:

• results

• query

• aggregations

• pages

Examples

# basic class stuff
gCases = cases()
resp = response(gCases)
class(resp)
names(resp)

# And results from query
resp$results[[1]]

GenomicDataCommons documentation built on Nov. 8, 2020, 11:08 p.m.