Man pages for Glimma
Interactive HTML graphics
| arraydata | Example microarray for the study of Ezh2. |
| as.hexcol | Numeric to hex colour converter |
| buildXYData | XY Data Object Builder |
| extractGroups | extractGroups |
| glBar | Glimma MD Plot |
| glBar.default | Glimma Bar Plot |
| glimma | Glimma: interactive graphics from limma |
| glimmaMA | Glimma MA Plot |
| glimmaMA.DESeqDataSet | Glimma MA Plot |
| glimmaMA.DGEExact | Glimma MA Plot |
| glimmaMA.DGELRT | Glimma MA Plot |
| glimmaMA.MArrayLM | Glimma MA Plot |
| glimmaMDS | Glimma MDS Plot |
| glimmaMDS.default | Glimma MDS Plot |
| glimmaMDS.DESeqDataSet | Glimma MDS Plot |
| glimmaMDS.DGEList | Glimma MDS Plot |
| glimma_plot | Glimma plot manager |
| glimmaVolcano | Glimma Volcano Plot |
| glimmaVolcano.DESeqDataSet | Glimma Volcano Plot |
| glimmaVolcano.DGEExact | Glimma Volcano Plot |
| glimmaVolcano.DGELRT | Glimma Volcano Plot |
| glimmaVolcano.MArrayLM | Glimma Volcano Plot |
| glimmaXY | Glimma XY Plot |
| glimmaXYWidget | GlimmaXY HTMLWidget Wrapper |
| gllink | Plot linkages |
| glMDPlot | Glimma MD Plot |
| glMDPlot.default | Glimma MD Plot |
| glMDPlot.DESeqDataSet | Glimma MD Plot |
| glMDPlot.DESeqResults | Glimma MD Plot |
| glMDPlot.DGEExact | Glimma MD Plot |
| glMDPlot.DGELRT | Glimma MD Plot |
| glMDPlot.MArrayLM | Glimma MD Plot |
| glMDRmd | glMDPlot Rmarkdown link and instructions |
| glMDSPlot | Glimma MDS Plot |
| glMDSPlot.default | Glimma MDS Plot |
| glMDSPlot.DESeqDataSet | Glimma MDS Plot |
| glMDSPlot.DGEList | Glimma MDS Plot |
| glScatter | Glimma Scatter Plot |
| glScatter.default | Glimma Scatter Plot |
| glTable | Glimma Table |
| gltablink | Plot linkages |
| glXYPlot | Glimma XY Plot |
| is.hex | Hexcode colours |
| lymphomaRNAseq | Mouse based RNAseq data for study of smchd1 gene. |
| makeJson | JSON converter for R objects |
| makeJson.data.frame | JSON converter for data frames |
| makeJson.jschart | JSON converter for chart objects |
