Heatplus: Heatmaps with row and/or column covariates and colored clusters

Display a rectangular heatmap (intensity plot) of a data matrix. By default, both samples (columns) and features (row) of the matrix are sorted according to a hierarchical clustering, and the corresponding dendrogram is plotted. Optionally, panels with additional information about samples and features can be added to the plot.

AuthorAlexander Ploner <Alexander.Ploner@ki.se>
Date of publicationNone
MaintainerAlexander Ploner <Alexander.Ploner@ki.se>
LicenseGPL (>= 2)
Version2.20.0
https://github.com/alexploner/Heatplus

View on Bioconductor

Files in this package

Heatplus/DESCRIPTION
Heatplus/NAMESPACE
Heatplus/NEWS
Heatplus/R
Heatplus/R/annHeatmap.R Heatplus/R/oldHeatplus.R
Heatplus/build
Heatplus/build/vignette.rds
Heatplus/inst
Heatplus/inst/doc
Heatplus/inst/doc/annHeatmap.R
Heatplus/inst/doc/annHeatmap.Rnw
Heatplus/inst/doc/annHeatmap.pdf
Heatplus/inst/doc/annHeatmapCommentedSource.R
Heatplus/inst/doc/annHeatmapCommentedSource.Rnw
Heatplus/inst/doc/annHeatmapCommentedSource.pdf
Heatplus/inst/doc/oldHeatplus.R
Heatplus/inst/doc/oldHeatplus.Rnw
Heatplus/inst/doc/oldHeatplus.pdf
Heatplus/man
Heatplus/man/BrewerClusterCol.Rd Heatplus/man/RGBColVec.Rd Heatplus/man/Undocumented.Rd Heatplus/man/annHeatmap.Rd Heatplus/man/annHeatmap2.Rd Heatplus/man/breakColors.Rd Heatplus/man/convAnnData.Rd Heatplus/man/doLegend.Rd Heatplus/man/g2r.colors.Rd Heatplus/man/heatmapLayout.Rd Heatplus/man/heatmap_2.Rd Heatplus/man/heatmap_plus.Rd Heatplus/man/modifyExistingList.Rd Heatplus/man/niceBreaks.Rd Heatplus/man/oldCutplot.dendrogram.Rd Heatplus/man/oldPicketplot.Rd Heatplus/man/picketPlot.Rd Heatplus/man/plot.annHeatmap.Rd Heatplus/man/print.annHeatmap.Rd Heatplus/man/regHeatmap.Rd
Heatplus/vignettes
Heatplus/vignettes/annHeatmap.Rnw
Heatplus/vignettes/annHeatmapCommentedSource.Rnw
Heatplus/vignettes/oldHeatplus.Rnw

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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