API for IPO
Automated Optimization of XCMS Data Processing parameters
| Global functions | |
|---|---|
| IPO | Man page |
| IPO-package | Man page |
| RCSandGSIncreased | Source code |
| attachList | Man page Source code |
| calcMaximumCarbon | Source code |
| calcPPS | Man page Source code |
| calculateXcmsSet | Man page Source code |
| checkIntensitiesAtRtBoundaries | Source code |
| checkNormalDistribution | Source code |
| checkParams | Source code |
| checkRetGroupSetParams | Source code |
| checkSinusDistribution | Source code |
| checkXcmsSetParams | Source code |
| combineParams | Man page Source code |
| createModel | Man page Source code |
| decode | Man page Source code |
| decodeAll | Man page Source code |
| encode | Man page Source code |
| expand.grid.subset | Source code |
| findIsotopes.CAMERA | Man page Source code |
| findIsotopes.IPO | Man page Source code |
| getBbdParameter | Man page Source code |
| getCcdParameter | Man page Source code |
| getClusterType | Source code |
| getDefaultRetCorCenterSample | Man page Source code |
| getDefaultRetGroupStartingParams | Man page Source code |
| getDefaultXcmsSetStartingParams | Man page Source code |
| getIntensitiesFromRawdata | Source code |
| getMaxSettings | Source code |
| getMaximumLevels | Source code |
| getNormalizedResponse | Man page Source code |
| getRGTVValues | Man page Source code |
| optimizeRetGroup | Man page Source code |
| optimizeRetGroupSlaveCluster | Source code |
| optimizeSlaveCluster | Source code |
| optimizeXcmsSet | Man page Source code |
| peaks_IPO | Source code |
| plotContours | Source code |
| resultIncreased | Source code |
| retGroupCalcExperimentsCluster | Source code |
| retGroupExperimentStatistic | Source code |
| retcorGroup | Source code |
| testNormalDistribution | Source code |
| testSinusDistribution | Source code |
| toMatrix | Man page Source code |
| typeCastParams | Man page Source code |
| writeParamsTable | Man page Source code |
| writeRScript | Man page Source code |
| xcmsSetExperimentsCluster | Source code |
| xcmsSetStatistic | Source code |
