AtomicList-class | Lists of Atomic Vectors in Natural and Rle Form |
AtomicList-utils | Common operations on AtomicList objects |
CompressedHitsList-class | CompressedHitsList objects |
CompressedList-class | CompressedList objects |
coverage-methods | Coverage of a set of ranges |
DataFrameList-class | List of DataFrames |
extractList | Group elements of a vector-like object into a list-like... |
extractListFragments | Extract list fragments from a list-like object |
findOverlaps-methods | Finding overlapping ranges |
Grouping-class | Grouping objects |
Hits-class-leftovers | Examples of basic manipulation of Hits objects |
IntegerRanges-class | IntegerRanges objects |
IntegerRangesList-class | IntegerRangesList objects |
inter-range-methods | Inter range transformations of an IntegerRanges, Views,... |
intra-range-methods | Intra range transformations of an IRanges, IPos, Views,... |
IPos-class | IPos objects |
IPosRanges-class | IPosRanges objects |
IPosRanges-comparison | Comparing and ordering ranges |
IRanges-class | IRanges and NormalIRanges objects |
IRanges-constructor | The IRanges constructor and supporting functions |
IRanges-internals | IRanges internals |
IRangesList-class | List of IRanges and NormalIRanges |
IRanges-utils | IRanges utility functions |
MaskCollection-class | MaskCollection objects |
multisplit | Split elements belonging to multiple groups |
NCList-class | Nested Containment List objects |
nearest-methods | Finding the nearest range/position neighbor |
RangedSelection-class | Selection of ranges and columns |
range-squeezers | Squeeze the ranges out of a range-based object |
read.Mask | Read a mask from a file |
reverse-methods | reverse |
Rle-class-leftovers | Rle objects (old man page) |
RleViews-class | The RleViews class |
RleViewsList-class | List of RleViews |
seqapply | 2 methods that should be documented somewhere else |
setops-methods | Set operations on IntegerRanges and IntegerRangesList objects |
slice-methods | Slice a vector-like or list-like object |
Vector-class-leftovers | Vector objects (old man page) |
Views-class | Views objects |
ViewsList-class | List of Views |
view-summarization-methods | Summarize views on a vector-like object with numeric values |
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