API for MethylAid
Visual and interactive quality control of large Illumina DNA Methylation array data sets
| Global functions | |
|---|---|
| .arrayType | Source code |
| .combine | Source code |
| as.background | Man page |
| as.background,summarizedData-method | Man page |
| combine,summarizedData,ANY-method | Man page |
| exampleData | Man page |
| finalize | Source code |
| gcscatterplot | Source code |
| getHighLightIndex | Source code |
| getOutliers | Source code |
| ggplot2base | Source code |
| initialize | Source code |
| plotBS | Source code |
| plotDP | Source code |
| plotHC | Source code |
| plotMU | Source code |
| plotOP | Source code |
| prepareData | Source code |
| printSummarizedData | Source code |
| qcboxplot | Source code |
| qcplot | Source code |
| qcsampleplot | Source code |
| qcscatterplot | Source code |
| reduce | Source code |
| replaceZero | Source code |
| replaceZeroInfo | Source code |
| rotateData | Source code |
| server | Source code |
| setHighlight | Source code |
| setOutliers | Source code |
| show,summarizedData-method | Man page |
| summarize | Man page Source code |
| summarizeControls | Source code |
| summarizeMUvalues | Source code |
| summarizeParallel | Source code |
| summarizePerBatch | Source code |
| summarizeWholeBunch | Source code |
| summarizedData-class | Man page |
| ui | Source code |
| visualize | Man page |
| visualize,summarizedData-method | Man page |
