API for Organism.dplyr
dplyr-based Access to Bioconductor Annotation Resources

Global functions
AccnumFilter Man page
AliasFilter Man page
BasicFilter-class Man page
CdsChromFilter Man page
CdsIdFilter Man page
CdsNameFilter Man page
CdsStrandFilter Man page
CharacterFilter-class Man page
EnsemblFilter Man page
EnsemblprotFilter Man page
EnsembltransFilter Man page
EnzymeFilter Man page
EvidenceFilter Man page
EvidenceallFilter Man page
ExonChromFilter Man page
ExonStrandFilter Man page
FlybaseCgFilter Man page
FlybaseFilter Man page
FlybaseProtFilter Man page
GeneChromFilter Man page
GeneStrandFilter Man page
Genomic-Extractors Man page
GoFilter Man page
GoallFilter Man page
IntegerFilter-class Man page
IpiFilter Man page
MapFilter Man page
MgiFilter Man page
OmimFilter Man page
OntologyFilter Man page
OntologyallFilter Man page
PfamFilter Man page
PmidFilter Man page
PrositeFilter Man page
RefseqFilter Man page
TxChromFilter Man page
TxStrandFilter Man page
TxTypeFilter Man page
UTRsByTranscript Source code
UnigeneFilter Man page
WormbaseFilter Man page
ZfinFilter Man page
add_view Source code
alter_ensembl_ids Source code
alter_table Source code
byFun Source code
cds Man page
cdsBy Man page
cdsBy_tbl Man page
cds_tbl Man page
checkCompatibleStartEnds Source code
checkDepth Source code
check_filters Source code
cleanOutput Source code
columns,src_organism-method Man page
deleteTempTables Source code
exons Man page
exonsBy Man page
exonsBy_tbl Man page
exons_tbl Man page
fieldToClass Source code
fields Source code
filterByKeys Source code
filterFactory Source code
filter_init Source code
filter_list Source code
filter_names Source code
findPkg Source code
findTable Source code
fiveUTRsByTranscript Man page
fiveUTRsByTranscript_tbl Man page
fullJoin Source code
genes Man page
genes_tbl Man page
getAllTableValues Source code
getFields Source code
getSeqinfo Source code
getSplicings Source code
get_ensembl_id_len Source code
hg38light Man page Source code
intronsByTranscript Man page
intronsByTranscript,src_organism-method Man page
intronsByTranscript_tbl Man page Source code
keys Source code
keys,src_organism-method Man page
keytypes,src_organism-method Man page
leftJoin Source code
mapIds,src_organism-method Man page
mm10light Man page Source code
nnerJoin Source code
onLoad Source code
orgPackageName,src_organism-method Man page
parseFilterInput Source code
promoters Man page
promoters,src_organism-method Man page
promoters_tbl Man page Source code Source code
s_columns_afl Source code
select Source code
select,src_organism-method Man page
selectColumns Source code
select_.tbl_organism Man page Source code
select_tbl Man page Source code
seqinfo,src_organism-method Man page
show,BasicFilter-method Man page
show,CharacterFilter-method Man page
show,IntegerFilter-method Man page
src_organism Man page Source code
src_tbls.src_organism Man page Source code
src_ucsc Man page Source code
supportedFilters Source code
supportedFilters,src_organism-method Man page
supportedOrganisms Man page Source code
tableNames Source code
tbl.src_organism Man page Source code
tblFunctions Source code
tblFunctionsBy_UTR Source code
tbl_join Source code
terTable Source code
threeUTRsByTranscript Man page
threeUTRsByTranscript_tbl Man page
toGRanges Source code
toGRangesList Source code
transcripts Man page
transcriptsBy Man page
transcriptsBy_tbl Man page
transcripts_tbl Man page
updateSeqinfo Source code
valid_condition Source code
xscripts Source code
xscriptsBy_tbl Source code
xscripts_tbl Source code
Organism.dplyr documentation built on May 2, 2018, 4:23 a.m.