PADOG: Pathway Analysis with Down-weighting of Overlapping Genes (PADOG)
Version 1.18.0

This package implements a general purpose gene set analysis method called PADOG that downplays the importance of genes that apear often accross the sets of genes to be analyzed. The package provides also a benchmark for gene set analysis methods in terms of sensitivity and ranking using 24 public datasets from KEGGdzPathwaysGEO package.

Getting started

Package details

AuthorAdi Laurentiu Tarca <atarca@med.wayne.edu>; Zhonghui Xu <zhonghui.xu@gmail.com>
Bioconductor views Microarray OneChannel TwoChannel
MaintainerAdi Laurentiu Tarca <atarca@med.wayne.edu>
LicenseGPL (>= 2)
Version1.18.0
URL
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("PADOG")

Try the PADOG package in your browser

Any scripts or data that you put into this service are public.

PADOG documentation built on May 31, 2017, 1:51 p.m.