PROPER: PROspective Power Evaluation for RNAseq

This package provide simulation based methods for evaluating the statistical power in differential expression analysis from RNA-seq data.

AuthorHao Wu
Date of publicationNone
MaintainerHao Wu <hao.wu@emory.edu>
LicenseGPL
Version1.6.0

View on Bioconductor

Files

PROPER/DESCRIPTION
PROPER/NAMESPACE
PROPER/R
PROPER/R/DEdetection.R PROPER/R/estParam.R PROPER/R/plots.R PROPER/R/power.R PROPER/R/simOptions.2grp.R PROPER/R/simOptions.util.R PROPER/R/simfuns.R
PROPER/build
PROPER/build/vignette.rds
PROPER/data
PROPER/data/GE.human.RData
PROPER/data/bottomly.RData
PROPER/data/cheung.RData
PROPER/data/datalist
PROPER/data/gilad.RData
PROPER/data/maqc.RData
PROPER/data/pbmc.RData
PROPER/doc
PROPER/doc/NEWS
PROPER/doc/PROPER.pdf
PROPER/inst
PROPER/inst/CITATION
PROPER/inst/doc
PROPER/inst/doc/PROPER.R
PROPER/inst/doc/PROPER.Rnw
PROPER/inst/doc/PROPER.pdf
PROPER/man
PROPER/man/RNAseq.SimOptions.2grp.Rd PROPER/man/comparePower.Rd PROPER/man/estParam.Rd PROPER/man/historicalData.Rd PROPER/man/plotPowerHist.Rd PROPER/man/plots.Rd PROPER/man/power.seqDepth.Rd PROPER/man/runSims.Rd PROPER/man/simRNAseq.Rd PROPER/man/summaryPower.Rd
PROPER/vignettes
PROPER/vignettes/FDC.pdf
PROPER/vignettes/PROPER.Rnw
PROPER/vignettes/TD.pdf
PROPER/vignettes/all.pdf
PROPER/vignettes/filter.pdf
PROPER/vignettes/powers.pdf

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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