Description Usage Arguments Author(s)
View source: R/normalize_Rawfiles.R
Given a directory with *.raw files, it will normalize the PMA and PMB intensities in each file using Xba.CQV (composite quantile vector) and return the normalized values written to *.norm files corresponding to its *.raw files. EG: If two *.raw files are used, two *.norm files will be returned. This normalization simply puts the probe data on the same scale as the training data.
1 2 | normalize_Rawfiles(cqvfile = "",
probefiledir = getwd())
|
cqvfile |
Character string specifying the CQV filename (e.g., Xba.CQV) (required) |
probefiledir |
Character string specifying location of the *.raw files and *.norm files (optional) |
Nusrat Rabbee <nrabbee@post.harvard.edu>, Gary Wong <wongg62@gmail.com>
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