RWebServices: Expose R functions as web services through Java/Axis/Apache

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This package provides mechanisms for automatic function prototyping and exposure of R functionality in a web services environment.

Author
Nianhua Li, MT Morgan
Date of publication
None
Maintainer
Martin Morgan <martin.morgan@roswellpark.org>
License
file LICENSE
Version
1.36.0

View on Bioconductor

Man pages

ArrayAndMatrix-class
Class "NumericMatrix" and friends
converters
Convert between R objects and their Java representation.
createMap
Create Java function signatures from R functions
FileReferences
FileReferences constructor and accessors
FileReferences-class
Class "FileReferences"
generateDataMap
Create java beans and mapping functions for a R data type
generateDataTest
Create a Java program to test R - Java data type mapping
generateFunctionMap
Create java wrapper functions for a list of R functions
getRSessionInfo
Report R session information in a web-services friendly...
importDataCvt
Load R - Java data converters.
printLookup
Print R-Java data type mapping information
retrieve
Retrieve file references from remote locations
RJavaPkgFunctions-class
Java signatures derived from R methods
RJavaSignature-class
String representations of R type signatures from R functions
RWebServices.package
Expose R functions as web services through Java/Axis/Apache
SinkOutput-class
Results captured by calls to sinkSetup and sinkRetrieve
sinkSetup
Capture and retrieve screen output
testUtils
Utilities for facilitating data and method tests
typeInfo2Java
Create Java-like function signatures from R functions
unpackAntScript
Unpack script for building, testing, and installing packages.

Files in this package

RWebServices/.BBSoptions
RWebServices/DESCRIPTION
RWebServices/LICENSE
RWebServices/NAMESPACE
RWebServices/R
RWebServices/R/AllMkMapClasses.R
RWebServices/R/ArrayAndMatrix-class.R
RWebServices/R/FileReferences-class.R
RWebServices/R/basicConvert.R
RWebServices/R/basicConvert2.R
RWebServices/R/cConvert.R
RWebServices/R/createMap.R
RWebServices/R/getRSessionInfo.R
RWebServices/R/javaReservedWord.R
RWebServices/R/mkConverter.R
RWebServices/R/mkDataMap.R
RWebServices/R/mkFuncMap.R
RWebServices/R/mkJavaBean.R
RWebServices/R/mkMapUtil.R
RWebServices/R/mkTest.R
RWebServices/R/sink.R
RWebServices/R/testUtil.R
RWebServices/R/typeInfoToJava.R
RWebServices/R/unpackAntScript.R
RWebServices/R/zzz.R
RWebServices/build
RWebServices/build/vignette.rds
RWebServices/cleanup
RWebServices/configure
RWebServices/configure.in
RWebServices/inst
RWebServices/inst/cagrid
RWebServices/inst/cagrid/schemas
RWebServices/inst/doc
RWebServices/inst/doc/EnablingPackages.R
RWebServices/inst/doc/EnablingPackages.Rnw
RWebServices/inst/doc/EnablingPackages.pdf
RWebServices/inst/doc/InstallingAndTesting.R
RWebServices/inst/doc/InstallingAndTesting.Rnw
RWebServices/inst/doc/InstallingAndTesting.pdf
RWebServices/inst/doc/LessonsLearned.Rnw
RWebServices/inst/doc/LessonsLearned.pdf
RWebServices/inst/doc/RToJava.R
RWebServices/inst/doc/RToJava.Rnw
RWebServices/inst/doc/RToJava.pdf
RWebServices/inst/doc/RelatedWork.Rnw
RWebServices/inst/doc/RelatedWork.pdf
RWebServices/inst/lib
RWebServices/inst/lib/Environment.jar
RWebServices/inst/lib/ant-contrib-1.0b3.jar
RWebServices/inst/lib/antform.jar
RWebServices/inst/lib/geronimo-jms_1.1_spec-1.1.1.jar
RWebServices/inst/lib/junit-4.1.jar
RWebServices/inst/lib/rservices.jar
RWebServices/inst/rservices
RWebServices/inst/rservices/build.xml
RWebServices/inst/rservices/docs
RWebServices/inst/rservices/docs/allclasses-frame.html
RWebServices/inst/rservices/docs/allclasses-noframe.html
RWebServices/inst/rservices/docs/constant-values.html
RWebServices/inst/rservices/docs/deprecated-list.html
RWebServices/inst/rservices/docs/help-doc.html
RWebServices/inst/rservices/docs/index-all.html
RWebServices/inst/rservices/docs/index.html
RWebServices/inst/rservices/docs/org
RWebServices/inst/rservices/docs/org/bioconductor
RWebServices/inst/rservices/docs/org/bioconductor/packages
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/FileReference.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/FileReferences.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/MockService.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RArray.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RChar.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RComplex.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RDataFrame.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/REnvironment.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RFactor.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RFileReferences.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RInteger.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RJArray.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RJCharArray.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RJCharMatrix.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RJComplex.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RJComplexArray.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RJComplexMatrix.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RJDataFrame.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RJFactor.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RJIntegerArray.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RJIntegerMatrix.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RJLogicalArray.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RJLogicalMatrix.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RJMatrix.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RJNumericArray.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RJNumericMatrix.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RJRawArray.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RJRawMatrix.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RJUtil.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RList.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RLogical.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RMatrix.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RNumeric.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RObject.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RRaw.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RServicesConnection.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RServicesEnv.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RUnknown.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/RVector.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/TestDataCreater.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/package-frame.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/package-summary.html
RWebServices/inst/rservices/docs/org/bioconductor/packages/rservices/package-tree.html
RWebServices/inst/rservices/docs/overview-tree.html
RWebServices/inst/rservices/docs/package-list
RWebServices/inst/rservices/docs/resources
RWebServices/inst/rservices/docs/resources/inherit.gif
RWebServices/inst/rservices/docs/serialized-form.html
RWebServices/inst/rservices/docs/stylesheet.css
RWebServices/inst/rservices/src
RWebServices/inst/rservices/src/org
RWebServices/inst/rservices/src/org/bioconductor
RWebServices/inst/rservices/src/org/bioconductor/packages
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/FileReference.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/FileReferences.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/MockService.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RArray.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RChar.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RComplex.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RDataFrame.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/REnvironment.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RFactor.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RFileReferences.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RInteger.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RJArray.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RJCharArray.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RJCharMatrix.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RJComplex.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RJComplexArray.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RJComplexMatrix.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RJDataFrame.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RJFactor.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RJFileReferences.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RJIntegerArray.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RJIntegerMatrix.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RJLogicalArray.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RJLogicalMatrix.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RJMatrix.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RJNumericArray.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RJNumericMatrix.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RJRawArray.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RJRawMatrix.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RJUtil.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RList.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RLogical.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RMatrix.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RNumeric.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RObject.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RRaw.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RServicesConnection.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RServicesEnv.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RUnknown.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/RVector.java
RWebServices/inst/rservices/src/org/bioconductor/packages/rservices/TestDataCreater.java
RWebServices/inst/scripts
RWebServices/inst/scripts/RWebServicesEnv.properties.in
RWebServices/inst/scripts/RWebServicesTuning.properties
RWebServices/inst/scripts/Rlogo.gif
RWebServices/inst/scripts/build.xml
RWebServices/inst/scripts/cagrid.xml
RWebServices/inst/scripts/userbuild.xml
RWebServices/inst/unitTests
RWebServices/inst/unitTests/R
RWebServices/inst/unitTests/R/AMakefile
RWebServices/inst/unitTests/R/ArrayAndMatrix_tests.R
RWebServices/inst/unitTests/R/FileReferences_tests.R
RWebServices/inst/unitTests/R/runall.sh
RWebServices/inst/unitTests/R/runalltests.R
RWebServices/inst/unitTests/R/runfile.sh
RWebServices/inst/unitTests/R/shared.R
RWebServices/inst/unitTests/build.xml
RWebServices/inst/unitTests/java
RWebServices/inst/unitTests/java/src
RWebServices/inst/unitTests/java/src/org
RWebServices/inst/unitTests/java/src/org/bioconductor
RWebServices/inst/unitTests/java/src/org/bioconductor/packages
RWebServices/inst/unitTests/java/src/org/bioconductor/packages/rservices
RWebServices/inst/unitTests/java/src/org/bioconductor/packages/rservices/CLevelConverterTest.java
RWebServices/inst/unitTests/java/src/org/bioconductor/packages/rservices/RClassTest.java
RWebServices/inst/unitTests/java/src/org/bioconductor/packages/rservices/RFileReferencesTest.java
RWebServices/inst/unitTests/java/src/org/bioconductor/packages/rservices/RJFileReferencesTest.java
RWebServices/inst/unitTests/java/src/org/bioconductor/packages/rservices/RJTypeTest.java
RWebServices/inst/unitTests/java/src/org/bioconductor/packages/rservices/RObjectsTest.java
RWebServices/inst/unitTests/java/src/org/bioconductor/packages/rservices/Rinput
RWebServices/inst/unitTests/java/src/org/bioconductor/packages/rservices/Rinput/ClassUnionConverter.R
RWebServices/inst/unitTests/java/src/org/bioconductor/packages/rservices/SJavaTypeTest.java
RWebServices/inst/unitTests/java/src/org/bioconductor/packages/rservices/TypeTestUtil.java
RWebServices/inst/unitTests/java/src/org/bioconductor/packages/rservices/testdata
RWebServices/inst/unitTests/java/src/org/bioconductor/packages/rservices/testdata/MyUnionFactory.java
RWebServices/inst/unitTests/java/src/org/bioconductor/packages/rservices/testdata/MyUnionRCharFactory.java
RWebServices/inst/unitTests/java/src/org/bioconductor/packages/rservices/testdata/MyUnionRLogicalFactory.java
RWebServices/inst/unitTests/java/src/org/bioconductor/packages/rservices/testdata/MyWrapper.java
RWebServices/man
RWebServices/man/ArrayAndMatrix-class.Rd
RWebServices/man/FileReferences-class.Rd
RWebServices/man/FileReferences.Rd
RWebServices/man/RJavaPkgFunctions-class.Rd
RWebServices/man/RJavaSignature-class.Rd
RWebServices/man/RWebServices.package.Rd
RWebServices/man/SinkOutput-class.Rd
RWebServices/man/converters.Rd
RWebServices/man/createMap.Rd
RWebServices/man/generateDataMap.Rd
RWebServices/man/generateDataTest.Rd
RWebServices/man/generateFunctionMap.Rd
RWebServices/man/getRSessionInfo.Rd
RWebServices/man/importDataCvt.Rd
RWebServices/man/printLookup.Rd
RWebServices/man/retrieve.Rd
RWebServices/man/sinkSetup.Rd
RWebServices/man/testUtils.Rd
RWebServices/man/typeInfo2Java.Rd
RWebServices/man/unpackAntScript.Rd
RWebServices/src
RWebServices/src/Makevars.in
RWebServices/src/RWebServicesConverters.c
RWebServices/src/RWebServicesConverters.h
RWebServices/src/init.c
RWebServices/vignettes
RWebServices/vignettes/EnablingPackages.Rnw
RWebServices/vignettes/InstallingAndTesting.Rnw
RWebServices/vignettes/LessonsLearned.Rnw
RWebServices/vignettes/RToJava.Rnw
RWebServices/vignettes/RelatedWork.Rnw
RWebServices/vignettes/rjtypes.jpg
RWebServices/vignettes/rtypes.jpg
RWebServices/vignettes/ws_conf_tip.txt