writeCWL: Write CWL

In Rcwl: An R interface to the Common Workflow Language

Description

write 'cwlParam' to cwl and yml.

Usage

writeCWL(cwl, prefix, docker = TRUE, ...)

Arguments

cwl	A 'cwlParam' or 'cwlStepParam' object.
prefix	The prefix of 'cwl' and 'yml' file to write.
docker	Whether to use docker.
...	Other options from 'yaml::write_yaml'.

Value

A CWL file and A YML file.

Examples

input1 <- InputParam(id = "sth")
echo <- cwlParam(baseCommand = "echo",
                 inputs = InputParamList(input1))
tf <- tempfile()
writeCWL(echo, tf)

Rcwl documentation built on Nov. 8, 2020, 8:11 p.m.