cwlUpdate: cwlUpdate

In RcwlPipelines: Bioinformatics pipelines based on Rcwl

Description

Function to sync and get the most updated Rcwl recipes from the RcwlRecipes github

Usage

cwlUpdate(cachePath = "Rcwl", force = FALSE, branch = "rcwl1.6")

Arguments

cachePath	The cache path of the BiocFileCache object to store the Rcwl tools and pipelines recipes.
force	Whether to clean existing recipes cache.
branch	The branch of github recipes repository. It can be "master" and "dev". "force = TRUE" is recommended when swithing branch.

Examples

## Not run: 
tools <- cwlUpdate()

## End(Not run)

RcwlPipelines documentation built on March 7, 2021, 2 a.m.