This package provides functions for pathway analysis based on REACTOME pathway database. It implements enrichment analysis, gene set enrichment analysis and several functions for visualization.
For details, please visit https://yulab-smu.top/biomedical-knowledge-mining-book/.
School of Basic Medical Sciences, Southern Medical University
Please cite the following article when using
G Yu, QY He*. ReactomePA: an R/Bioconductor package for reactome pathway analysis and visualization. Molecular BioSystems 2016, 12(2):477-479.
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