RnaSeqSampleSize: RnaSeqSampleSize

RnaSeqSampleSize package provides a sample size calculation method based on negative binomial model and the exact test for assessing differential expression analysis of RNA-seq data

Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("RnaSeqSampleSize")
AuthorShilin Zhao, Chung-I Li, Yan Guo, Quanhu Sheng, Yu Shyr
Bioconductor views DifferentialExpression ExperimentalDesign GeneExpression RNASeq Sequencing
Date of publicationNone
MaintainerShilin Zhao <zhaoshilin@gmail.com>
LicenseGPL (>= 2)
Version1.6.0

View on Bioconductor

Files

DESCRIPTION
NAMESPACE
NEWS
R
R/RcppExports.R R/convertIdOneToOne.R R/curve.R R/distribution.R R/estP.R R/estPower.R R/model.R R/optimize.R R/sampleSize.R R/uniroot.R
README.md
build
build/vignette.rds
inst
inst/doc
inst/doc/RnaSeqSampleSize.R
inst/doc/RnaSeqSampleSize.Rnw
inst/doc/RnaSeqSampleSize.pdf
man
man/convertIdOneToOne.Rd man/est_count_dispersion.Rd man/est_power.Rd man/est_power_curve.Rd man/est_power_distribution.Rd man/optimize_parameter.Rd man/plot_power_curve.Rd man/sample_size.Rd man/sample_size_distribution.Rd
src
src/RcppExports.cpp
src/RnaSeqSampleSize.c
src/bd0.c
src/cumsumBorder.cpp
src/dpq.h
src/nmath.h
src/stirlerr.c
vignettes
vignettes/RnaSeqSampleSize.Rnw

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