RnaSeqSampleSize: RnaSeqSampleSize

Share:

RnaSeqSampleSize package provides a sample size calculation method based on negative binomial model and the exact test for assessing differential expression analysis of RNA-seq data

Author
Shilin Zhao, Chung-I Li, Yan Guo, Quanhu Sheng, Yu Shyr
Date of publication
None
Maintainer
Shilin Zhao <zhaoshilin@gmail.com>
License
GPL (>= 2)
Version
1.6.0

View on Bioconductor

Man pages

convertIdOneToOne
convertId
est_count_dispersion
est_count_dispersion
est_power
est_power
est_power_curve
est_power_curve
est_power_distribution
est_power_distribution
optimize_parameter
optimize_parameter
plot_power_curve
plot_power_curve
sample_size
sample_size
sample_size_distribution
sample_size_distribution

Files in this package

RnaSeqSampleSize/DESCRIPTION
RnaSeqSampleSize/NAMESPACE
RnaSeqSampleSize/NEWS
RnaSeqSampleSize/R
RnaSeqSampleSize/R/RcppExports.R
RnaSeqSampleSize/R/convertIdOneToOne.R
RnaSeqSampleSize/R/curve.R
RnaSeqSampleSize/R/distribution.R
RnaSeqSampleSize/R/estP.R
RnaSeqSampleSize/R/estPower.R
RnaSeqSampleSize/R/model.R
RnaSeqSampleSize/R/optimize.R
RnaSeqSampleSize/R/sampleSize.R
RnaSeqSampleSize/R/uniroot.R
RnaSeqSampleSize/README.md
RnaSeqSampleSize/build
RnaSeqSampleSize/build/vignette.rds
RnaSeqSampleSize/inst
RnaSeqSampleSize/inst/doc
RnaSeqSampleSize/inst/doc/RnaSeqSampleSize.R
RnaSeqSampleSize/inst/doc/RnaSeqSampleSize.Rnw
RnaSeqSampleSize/inst/doc/RnaSeqSampleSize.pdf
RnaSeqSampleSize/man
RnaSeqSampleSize/man/convertIdOneToOne.Rd
RnaSeqSampleSize/man/est_count_dispersion.Rd
RnaSeqSampleSize/man/est_power.Rd
RnaSeqSampleSize/man/est_power_curve.Rd
RnaSeqSampleSize/man/est_power_distribution.Rd
RnaSeqSampleSize/man/optimize_parameter.Rd
RnaSeqSampleSize/man/plot_power_curve.Rd
RnaSeqSampleSize/man/sample_size.Rd
RnaSeqSampleSize/man/sample_size_distribution.Rd
RnaSeqSampleSize/src
RnaSeqSampleSize/src/RcppExports.cpp
RnaSeqSampleSize/src/RnaSeqSampleSize.c
RnaSeqSampleSize/src/bd0.c
RnaSeqSampleSize/src/cumsumBorder.cpp
RnaSeqSampleSize/src/dpq.h
RnaSeqSampleSize/src/nmath.h
RnaSeqSampleSize/src/stirlerr.c
RnaSeqSampleSize/vignettes
RnaSeqSampleSize/vignettes/RnaSeqSampleSize.Rnw