Statistical Inferences with MeDIP-seq Data (SIMD) to infer the methylation level for each CpG site

all_CpGsite_bin_chr18 | A simulation dataset of CpG sites. |

classifypvalue | calculate P-value in code EMtest. |

EM2_H1ESB1_MeDIP_sigleCpG | A simulation dataset of MeDIP CpG sites. |

EM2_H1ESB2_MeDIP_sigleCpG | A simulation dataset of MeDIP CpG sites. |

EMalgorithm | EM algorithm to infer CpG sites. |

emalgth | Calculate the probability on condition that the sums equal to... |

emalgth1 | Calculate the probability on condition that the sums more... |

EM_H1ESB1_MeDIP_sigleCpG | A simulation dataset of MeDIP CpG sites. |

EMtest | Inferring the methylation expression level of single sites. |

H1ESB1_MRE_sigleCpG | A simulation dataset of MRE CpG sites. |

H1ESB2_MRE_sigleCpG | A simulation dataset of MRE CpG sites. |

probBinom | Compute P-values for Medip-seq and MRE-seq data. |

SIMD-package | A method to infer the methylation expression level for each... |

three_mre_cpg | A simulation dataset of MRE CpG sites. |

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