|cisREfindbed||Create and preprocessing of the input for SVM2CRM analysis|
|createBed||Create bed file of predictions using svm.|
|createSVMinput||Take the output of findFeatureOverlap and then create a...|
|featSelectionWithKmeans||This function select the most meaningful variables in a...|
|findFeatureOverlap||Find the overlap of genomic regions between the output of...|
|getSignal||Model the signals of each histone marks around genomic...|
|performanceSVM||Estimate the performance of prediction.|
|plotFscore||Plot the F-score in relation with the sensitivity and...|
|plotROC||Plot the ROC curve of the best model|
|predictionGW||Perform prediction of cis-regulatory elements genome-wide|
|smoothInputFS||Smooth the signals of the histone marks to prepare the input...|
|tuningParametersCombROC||Test different models using different kernel of SVM, values...|
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