Filtering of lowly expressed features (e.g. genes) is a common step before performing statistical analysis, but an arbitrary threshold is generally chosen. SeqGate implements a method that rationalize this step by the analysis of the distibution of counts in replicate samples. The gate is the threshold above which sequenced features can be considered as confidently quantified.
|Author||Christelle Reynès [aut], Stéphanie Rialle [aut, cre]|
|Bioconductor views||DifferentialExpression GeneExpression RNASeq Sequencing Transcriptomics|
|Maintainer||Stéphanie Rialle <firstname.lastname@example.org>|
|License||GPL (>= 2.0)|
|Package repository||View on Bioconductor|
Install the latest version of this package by entering the following in R:
Any scripts or data that you put into this service are public.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.