API for SimFFPE
NGS Read Simulator for FFPE Tissue
| Global functions | |
|---|---|
| SimFFPE | Man page |
| SimFFPE-package | Man page |
| calcPhredScoreProfile | Man page Source code |
| countPhredScores | Source code |
| findReads | Source code |
| generateDistantChimericReads | Source code |
| generateDistantChimericSeqs | Source code |
| generateEnzymicCutSeq | Source code |
| generateNormalReads | Source code |
| generatePhredScore | Source code |
| generatePhredScores | Source code |
| generateReadNames | Source code |
| generateReads | Source code |
| generateRegionalChimericReads | Source code |
| generateRegionalChimericSeqs | Source code |
| generateTargetSeqs | Source code |
| readSimFFPE | Man page Source code |
| readsToFastq | Source code |
| targetReadSimFFPE | Man page Source code |
| targetRegionalChimericReads | Source code |
| targetRegionalChimericSeqs | Source code |
| writeReadsToFastq | Source code |
