Files in SimFFPE

NGS Read Simulator for FFPE Tissue

NEWS

NAMESPACE

DESCRIPTION

build/vignette.rds

build/partial.rdb

R/chimeric_seq_sim_targeted.R R/readSimFFPE_targeted.R R/read_generator.R R/chimeric_seq_modifier.R R/reads_to_fastq.R R/chimeric_seq_sim_WGS.R R/param_estimator.R R/readSimFFPE_WGS.R

vignettes/SimFFPE.Rnw

vignettes/ex1.png

vignettes/ex2.png

vignettes/ex3.png

man/readSimFFPE.Rd man/targetReadSimFFPE.Rd man/SimFFPE-package.Rd man/calcPhredScoreProfile.Rd

inst/doc/SimFFPE.Rnw

inst/doc/SimFFPE.pdf inst/doc/SimFFPE.R

inst/extdata/example.fasta

inst/extdata/PhredScoreProfile1.txt

inst/extdata/regionsSim.txt

inst/extdata/example.bam

inst/extdata/regionsBam.txt

inst/extdata/example.bam.bai

inst/extdata/PhredScoreProfile2.txt

inst/script/information.txt

SimFFPE documentation built on Nov. 8, 2020, 5:44 p.m.