Man pages for SomaticSignatures
Somatic Signatures
| cluster-spetrum | Cluster Mutational Spectrum |
| decomposition-functions | Decomposition Functions for Somatic Signatures |
| gc | GC Content |
| granges-utils | GRanges converter functions |
| hs-chrs | Human Chromosome Names |
| kmers | Kmer Frequency |
| kmers-data | Kmer datasets |
| motif-functions | Group somatic moticfs |
| mutational-normalization | Normalize Somatic Motifs |
| mutational-plots | Mutational Plots |
| mutational-signatures | Estimate Somatic Signatures |
| MutationalSignatures-class | 'MutationalSignatures' class and methods |
| mutation-context | mutationContext functions |
| mutation-distribution | Distributions of mutational locations. |
| mutect | readMutect |
| number-signatures | Number of Signatures |
| sca-data | SomaticCancerAlterations Results |
| signature-plot-functions | Plot Mutational Signatures |
| signatures21-data | 21 Signatures |
| SomaticSignatures-package | SomaticSignatures package |
| utils | Utility functions |
