SomaticSignatures: Somatic Signatures

The SomaticSignatures package identifies mutational signatures of single nucleotide variants (SNVs). It provides a infrastructure related to the methodology described in Nik-Zainal (2012, Cell), with flexibility in the matrix decomposition algorithms.

Package details

AuthorJulian Gehring
Bioconductor views Clustering GenomicVariation Sequencing SomaticMutation StatisticalMethod Visualization
MaintainerJulian Gehring <jg-bioc@gmx.com>
LicenseMIT + file LICENSE
Version2.26.0
URL https://github.com/juliangehring/SomaticSignatures
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("SomaticSignatures")

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SomaticSignatures documentation built on Nov. 8, 2020, 5:52 p.m.