Biocview "GenomicVariation"

Accesses MyVariant.info variant query and annotation services
Accesses MyVariant.info variant query and annotation services
Accesses MyVariant.info variant query and annotation services
Analysing Illumina HumanMethylation BeadChip Data
Analysing Illumina HumanMethylation BeadChip Data
Analysis of Copy Number Variation in Single-Cell-Sequencing Data
Analysis of Copy Number Variation in Single-Cell-Sequencing Data
Analysis of Copy Number Variation in Single-Cell-Sequencing Data
An integrated analysis package of Gene expression and Copy number alteration
An integrated analysis package of Gene expression and Copy number alteration
A normalization method for Copy Number Aberration in cancer samples
A normalization method for Copy Number Aberration in cancer samples
A suite for analysis of rare genomic variants in whole genome sequencing data
A suite for analysis of rare genomic variants in whole genome sequencing data
Chromosome Instability Index
Chromosome Instability Index
CNV detection tool for targeted NGS panel data
Detecting SNPs with interactive effects on a quantitative trait
Detecting SNPs with interactive effects on a quantitative trait
Empirical Bayesian approach to mutational signature discovery
Empirical Bayesian approach to mutational signature discovery
Empirical Bayesian approach to mutational signature discovery
Feature-based association and gene-set enrichment for copy number alteration analysis in cancer
Feature-based association and gene-set enrichment for copy number alteration analysis in cancer
Gene set analysis methods for SNP association p-values that lie in genes in given gene sets
Gene set analysis methods for SNP association p-values that lie in genes in given gene sets
Get inversion status in predefined regions
Get inversion status in predefined regions
Identification and Assessment of Single Nucleotide Variants through Shifts in Non-Consensus Base Call Frequencies
Identification and Assessment of Single Nucleotide Variants through Shifts in Non-Consensus Base Call Frequencies
Identification and Assessment of Single Nucleotide Variants through Shifts in Non-Consensus Base Call Frequencies
Identification of candidate genes associated with genetic variation
Identification of candidate genes associated with genetic variation
Identification of candidate genes associated with genetic variation
Microbial Comparative Genomics in R
Microbial Comparative Genomics in R
Microbial Comparative Genomics in R
Mosaic Aneuploidy Detection and Quantification using Massive Parallel Sequencing Data
Mosaic Aneuploidy Detection and Quantification using Massive Parallel Sequencing Data
Mosaic Aneuploidy Detection and Quantification using Massive Parallel Sequencing Data
Prediction of intronic splicing branchpoints
Prediction of intronic splicing branchpoints
Prediction of intronic splicing branchpoints
R package for RIVER (RNA-Informed Variant Effect on Regulation)
R package for RIVER (RNA-Informed Variant Effect on Regulation)
R package for RIVER (RNA-Informed Variant Effect on Regulation)
R package for RIVER (RNA-Informed Variant Effect on Regulation)
Somatic Signatures
Somatic Signatures
Somatic Signatures
Subclonal copy number and LOH prediction from whole genome sequencing of tumours
Subclonal copy number and LOH prediction from whole genome sequencing of tumours
Subclonal copy number and LOH prediction from whole genome sequencing of tumours
Tools for counting and visualising mutations in a target location
Tools for counting and visualising mutations in a target location
Tools for counting and visualising mutations in a target location
TVTB: The VCF Tool Box
TVTB: The VCF Tool Box
TVTB: The VCF Tool Box
TVTB: The VCF Tool Box
Yet Another Package for Signature Analysis
Yet Another Package for Signature Analysis
Yet Another Package for Signature Analysis
Yet Another Package for Signature Analysis