comm03/trysomesigs: Somatic Signatures

The SomaticSignatures package identifies mutational signatures of single nucleotide variants (SNVs). It provides a infrastructure related to the methodology described in Nik-Zainal (2012, Cell), with flexibility in the matrix decomposition algorithms.

Getting started

Package details

AuthorJulian Gehring (EMBL Heidelberg)
Bioconductor views Clustering GenomicVariation Sequencing SomaticMutation StatisticalMethod Visualization
MaintainerJulian Gehring <julian.gehring@embl.de>
LicenseMIT + file LICENSE
Version2.7.4
URL http://bioconductor.org/packages/release/bioc/html/SomaticSignatures.html https://github.com/julian-gehring/SomaticSignatures-release
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("comm03/trysomesigs")
comm03/trysomesigs documentation built on May 15, 2019, 1:14 p.m.