mutational-plots: Mutational Plots

Description Usage Arguments Details Value

Description

Plots for variant analysis

Usage

1
plotVariantAbundance(x, group = NULL, alpha = 0.5, size = 2)

Arguments

x

A VRanges object [required].

group

Grouping variable, refers to a column name in 'x'. By default, no grouping is performed.

alpha

Alpha value for data points.

size

Size value for data points.

Details

The 'plotVariantAbundance' shows the variant frequency in relation to the total coverage at each variant position. This can be useful for examining the support of variant calls.

Value

A 'ggplot' object.


comm03/trysomesigs documentation built on May 15, 2019, 1:14 p.m.