neurogenomics/MungeSumstats: Standardise summary statistics from GWAS

The *MungeSumstats* package is designed to facilitate the standardisation of GWAS summary statistics. It reformats inputted summary statisitics to include SNP, CHR, BP and can look up these values if any are missing. It also pefrorms dozens of QC and filtering steps to ensure high data quality and minimise inter-study differences.

Getting started

Package details

Bioconductor views ComparativeGenomics Genetics GenomeWideAssociation GenomicVariation Preprocessing SNP WholeGenome
Maintainer
LicenseArtistic-2.0
Version1.13.4
URL https://github.com/neurogenomics/MungeSumstats
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("neurogenomics/MungeSumstats")
neurogenomics/MungeSumstats documentation built on Aug. 10, 2024, 5:59 a.m.