HLindsay/CrispRVariants: Tools for counting and visualising mutations in a target location

CrispRVariants provides tools for analysing the results of a CRISPR-Cas9 mutagenesis sequencing experiment, or other sequencing experiments where variants within a given region are of interest. These tools allow users to localize variant allele combinations with respect to any genomic location (e.g. the Cas9 cut site), plot allele combinations and calculate mutation rates with flexible filtering of unrelated variants.

Getting started

Package details

AuthorHelen Lindsay [aut, cre]
Bioconductor views CRISPR DataRepresentation GeneticVariability GenomicVariation VariantDetection Visualization
MaintainerHelen Lindsay <helen.lindsay@uzh.ch>
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
HLindsay/CrispRVariants documentation built on May 28, 2019, 12:40 p.m.