Biocview "GeneticVariability"

A Genotype Calling Algorithm for Affymetrix SNP Arrays
A Genotype Calling Algorithm for Affymetrix SNP Arrays
Analysing Illumina HumanMethylation BeadChip Data
Analysing Illumina HumanMethylation BeadChip Data
analysis of co-regulatory network motifs and inference of 'dual regulons'.
analysis of co-regulatory network motifs and inference of 'dual regulons'.
analysis of co-regulatory network motifs and inference of 'dual regulons'.
Analysis of co-regulatory network motifs and inference of 'dual regulons'
A package to test genetic association with CNV data
A package to test genetic association with CNV data
BBCAnalyzer: an R/Bioconductor package for visualizing base counts
BBCAnalyzer: an R/Bioconductor package for visualizing base counts
Computational pipeline for computing probability of modification from structure probing experiment data
Computational pipeline for computing probability of modification from structure probing experiment data
Computational pipeline for computing probability of modification from structure probing experiment data
Cross omic genetic fingerprinting
Detection of subclonal SNVs in deep sequencing data.
Detection of subclonal SNVs in deep sequencing data.
Detection of subclonal SNVs in deep sequencing data.
Detection of subclonal SNVs in deep sequencing data.
Epistasis Analysis for Quantitative Traits by Functional Regression Model
Epistasis Analysis for Quantitative Traits by Functional Regression Model
Estimation of genetic and molecular regulatory networks from high-throughput genomics data
Estimation of genetic and molecular regulatory networks from high-throughput genomics data
Gene Set Regulation (GS-Reg)
Gene Set Regulation (GS-Reg)
GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with population structure and/or relatedness
GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with population structure and/or relatedness
GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with population structure and/or relatedness
Genotyping and QTL Mapping in DO Mice
Genotyping and QTL Mapping in DO Mice
Genotyping and QTL Mapping in DO Mice
GWAS Incorporating Networks in R
Handling and analysis of high-throughput microbiome census data
Handling and analysis of high-throughput microbiome census data
Handling and analysis of high-throughput microbiome census data
hapFabia: Identification of very short segments of identity by descent (IBD) characterized by rare variants in large sequencing data
hapFabia: Identification of very short segments of identity by descent (IBD) characterized by rare variants in large sequencing data
Infers clonal composition of a tumor
Infers clonal composition of a tumor
Integrative Statistics of alleLe Dependent Expression
Integrative Statistics of alleLe Dependent Expression
Methods to Find Pathways with Significantly Different Variability
Methods to Find Pathways with Significantly Different Variability
Normalization and reporting of Illumina SNP bead arrays
Normalization and reporting of Illumina SNP bead arrays
Perform Chromosomal Ancestry Differences (CAnD) Analyses
Perform Chromosomal Ancestry Differences (CAnD) Analyses
Reconstruction of transcriptional networks and analysis of master regulators
Reconstruction of transcriptional networks and analysis of master regulators
R package for RIVER (RNA-Informed Variant Effect on Regulation)
R package for RIVER (RNA-Informed Variant Effect on Regulation)
R package for RIVER (RNA-Informed Variant Effect on Regulation)
R package for RIVER (RNA-Informed Variant Effect on Regulation)
Run metabarcoding alalyses for multiple amplicons
samExploreR package: high-performance read summarisation to count vectors with avaliability of sequencing depth reduction simulation
samExploreR package: high-performance read summarisation to count vectors with avaliability of sequencing depth reduction simulation
samExploreR package: high-performance read summarisation to count vectors with avaliability of sequencing depth reduction simulation
SnpMatrix and XSnpMatrix classes and methods
SnpMatrix and XSnpMatrix classes and methods
SnpMatrix and XSnpMatrix classes and methods
software and data for analyses in genetics of gene expression
software and data for analyses in genetics of gene expression
Statistical analysis for sparse high-throughput sequencing
Statistical analysis for sparse high-throughput sequencing
Statistical analysis for sparse high-throughput sequencing
Subread sequence alignment for R
Subread sequence alignment for R
Testing of SNPs and SNP Interactions in Case-Parent Trio Studies
Testing of SNPs and SNP Interactions in Case-Parent Trio Studies
Testing of SNPs and SNP Interactions in Case-Parent Trio Studies
The snp.matrix and X.snp.matrix classes
The snp.matrix and X.snp.matrix classes
Tools for counting and visualising mutations in a target location
Tools for counting and visualising mutations in a target location
Tools for counting and visualising mutations in a target location
Tools for Exploratory Analysis of Variant Calls
Tools for Exploratory Analysis of Variant Calls
Tools for Genome Wide Association Studies
Tools for Genome Wide Association Studies
Tools for Genome Wide Association Studies
Tools for Testing Gene-Gene Interaction at the Gene Level
Tools for Testing Gene-Gene Interaction at the Gene Level
Tools for Testing Gene-Gene Interaction at the Gene Level
Tools for variant data
Tools for variant data
Tools for variant data
Transcriptional Regulatory Inference from Genetics of Gene ExpRession
Transcriptional Regulatory Inference from Genetics of Gene ExpRession
Transcriptional Regulatory Inference from Genetics of Gene ExpRession
TVTB: The VCF Tool Box
TVTB: The VCF Tool Box
TVTB: The VCF Tool Box
TVTB: The VCF Tool Box
Visualizations for copy number alterations
Visualizations for copy number alterations