FRGEpistasis: Epistasis Analysis for Quantitative Traits by Functional Regression Model

A Tool for Epistasis Analysis Based on Functional Regression Model

Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("FRGEpistasis")
AuthorFutao Zhang
Bioconductor views GeneticVariability Genetics NetworkInference Software
Date of publicationNone
MaintainerFutao Zhang <futoaz@gmail.com>
LicenseGPL-2
Version1.10.0

View on Bioconductor

Files

DESCRIPTION
NAMESPACE
NEWS
R
R/fRGEpistasis.R R/fRGInteraction.R R/fourierExpansion.R R/frgEpistasisTest.R R/innerEpi.R R/innerSnpListInteraction.R R/logTransPheno.R R/outerEpi.R R/outerSnpListInteraction.R R/pCAInteraction.R R/pCAPiontwiseEpistasis.R R/pointwiseInteraction.R R/rankTransPheno.R R/reduceGeno.R R/snpPairInteraction.R
build
build/vignette.rds
inst
inst/CITATION
inst/doc
inst/doc/FRGEpistasis.R
inst/doc/FRGEpistasis.Rnw
inst/doc/FRGEpistasis.pdf
inst/extdata
inst/extdata/chr1.map
inst/extdata/chr2.map
inst/extdata/chr3.map
inst/extdata/chr4.map
inst/extdata/chr5.map
inst/extdata/gene.list.csv
inst/extdata/list_geno.txt
inst/extdata/list_map.txt
inst/extdata/phenotype.csv
inst/extdata/simGeno-chr1.raw
inst/extdata/simGeno-chr2.raw
inst/extdata/simGeno-chr3.raw
inst/extdata/simGeno-chr4.raw
inst/extdata/simGeno-chr5.raw
man
man/FRGEpistasis-package.Rd man/fRGEpistasis.Rd man/fRGInteraction.Rd man/fourierExpansion.Rd man/frgEpistasisTest.Rd man/innerEpi.Rd man/innerSnpListInteraction.Rd man/logTransPheno.Rd man/outerEpi.Rd man/outerSnpListInteraction.Rd man/pCAInteraction.Rd man/pCAPiontwiseEpistasis.Rd man/pointwiseInteraction.Rd man/rankTransPheno.Rd man/reduceGeno.Rd man/snpPairInteraction.Rd
vignettes
vignettes/FRGEpistasis.Rnw

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.