BBCAnalyzer: BBCAnalyzer: an R/Bioconductor package for visualizing base counts
Version 1.6.0

BBCAnalyzer is a package for visualizing the relative or absolute number of bases, deletions and insertions at defined positions in sequence alignment data available as bam files in comparison to the reference bases. Markers for the relative base frequencies, the mean quality of the detected bases, known mutations or polymorphisms and variants called in the data may additionally be included in the plots.

Package details

AuthorSarah Sandmann
Bioconductor views Alignment Coverage GeneticVariability SNP Sequencing
MaintainerSarah Sandmann <sarah.sandmann@uni-muenster.de>
LicenseLGPL-3
Version1.6.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("BBCAnalyzer")

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BBCAnalyzer documentation built on May 31, 2017, 2:47 p.m.