ISoLDE: Integrative Statistics of alleLe Dependent Expression

This package provides ISoLDE a new method for identifying imprinted genes. This method is dedicated to data arising from RNA sequencing technologies. The ISoLDE package implements original statistical methodology described in the publication below.

AuthorChristelle Reynès [aut, cre], Marine Rohmer [aut], Guilhem Kister [aut]
Date of publicationNone
MaintainerChristelle Reynès <christelle.reynes@igf.cnrs.fr>
LicenseGPL (>= 2.0)
Version1.2.0
www.r-project.org

View on Bioconductor

Files

ISoLDE/DESCRIPTION
ISoLDE/NAMESPACE
ISoLDE/R
ISoLDE/R/Invisible_functions.R ISoLDE/R/filterT.R ISoLDE/R/isolde_test.R ISoLDE/R/readNormInput.R ISoLDE/R/readRawInput.R ISoLDE/R/readTarget.R
ISoLDE/README
ISoLDE/data
ISoLDE/data/filteredASRcounts.rda
ISoLDE/data/normASRcounts.rda
ISoLDE/data/rawASRcounts.rda
ISoLDE/data/target.rda
ISoLDE/inst
ISoLDE/inst/NEWS
ISoLDE/inst/extdata
ISoLDE/inst/extdata/normASRcounts_file.txt
ISoLDE/inst/extdata/rawASRcounts_file.txt
ISoLDE/inst/extdata/target_file.txt
ISoLDE/man
ISoLDE/man/ISoLDE-package.Rd ISoLDE/man/filterT.Rd ISoLDE/man/filteredASRcounts.Rd ISoLDE/man/isolde_test.Rd ISoLDE/man/normASRcounts.Rd ISoLDE/man/rawASRcounts.Rd ISoLDE/man/readNormInput.Rd ISoLDE/man/readRawInput.Rd ISoLDE/man/readTarget.Rd ISoLDE/man/target.Rd
ISoLDE/src
ISoLDE/src/Isolde.c
ISoLDE/src/Makevars
ISoLDE/tests
ISoLDE/tests/testsIsolde.R
ISoLDE/vignettes
ISoLDE/vignettes/ISoLDE_result_on_example.pdf
ISoLDE/vignettes/vignette.Rnw
ISoLDE/vignettes/workflow.pdf

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