Biocview "MathematicalBiology"

An R interface for computational modeling of tumor progression

Computational inference of epimutation rates and spectra from high-throughput DNA methylation data in plants

Compute the automorphisms between DNA's Abelian group representations

Contains utils for loading and manipulating two-layers structure network models

Correcting False Discovery Rates

Detection of clonally exclusive gene or pathway pairs in a cohort of cancer patients

Differential gene usage in immune repertoires

Estimating Local False Discovery Rates Using Empirical Bayes Methods

Estimating Local False Discovery Rates Using the Method of Moments

GeneVyuha is a systems biology tool to study the role of noise and parameter variation in gene regulatory circuits.

Handling Missing Individuals in Multi-Omics Data Integration

Identify Different Architectures of Sequence Elements

In-silico methods for genetic finemapping in inbred mice

Integrative Statistics of alleLe Dependent Expression

Methylation Analysis Based on Signal Detection

MethylIT utility

Network Perturbation Amplitude

Random walk with restart on multiplex and heterogeneous Networks

Systems biology tool to simulate gene regulatory circuits