AlphaBeta: Computational inference of epimutation rates and spectra from high-throughput DNA methylation data in plants

AlphaBeta is a computational method for estimating epimutation rates and spectra from high-throughput DNA methylation data in plants. The method has been specifically designed to: 1. analyze 'germline' epimutations in the context of multi-generational mutation accumulation lines (MA-lines). 2. analyze 'somatic' epimutations in the context of plant development and aging.

Package details

AuthorYadollah Shahryary Dizaji [cre, aut], Frank Johannes [aut], Rashmi Hazarika [aut]
Bioconductor views Epigenetics FunctionalGenomics Genetics MathematicalBiology
MaintainerYadollah Shahryary Dizaji <[email protected]>
LicenseGPL-3
Version1.0.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("AlphaBeta")

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AlphaBeta documentation built on Oct. 31, 2019, 4:39 a.m.