BOOTmodel: Bootstrap analysis with the best model
In AlphaBeta: Computational inference of epimutation rates and spectra from high-throughput DNA methylation data in plants
Description
Usage
Arguments
Value
Examples
Description
Bootstrap analysis with the best model
Usage
1
BOOTmodel(pedigree.data, Nboot, out.dir, out.name)
Arguments
pedigree.data
pedigree data.
Nboot
number of boot.
out.dir
output directory.
out.name
output file name.
Value
bootstrap result.
Examples
1
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9
## Get some toy data
inFile <- system.file("extdata/models/","ABneutral_CG_global_estimates.Rdata", package="AlphaBeta")
Nboot <- 4
out.name <-"Boot_CG_global_estimates_ABneutral"
Bout <- BOOTmodel(pedigree.data=inFile,
Nboot=Nboot,
out.dir=getwd(),
out.name=out.name)
summary(Bout)
AlphaBeta documentation built on Nov. 8, 2020, 6:30 p.m.
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Description Usage Arguments Value Examples
Description
Bootstrap analysis with the best model
Usage
1 | BOOTmodel(pedigree.data, Nboot, out.dir, out.name)
|
Arguments
pedigree.data |
pedigree data. |
Nboot |
number of boot. |
out.dir |
output directory. |
out.name |
output file name. |
Value
bootstrap result.
Examples
1 2 3 4 5 6 7 8 9 | ## Get some toy data
inFile <- system.file("extdata/models/","ABneutral_CG_global_estimates.Rdata", package="AlphaBeta")
Nboot <- 4
out.name <-"Boot_CG_global_estimates_ABneutral"
Bout <- BOOTmodel(pedigree.data=inFile,
Nboot=Nboot,
out.dir=getwd(),
out.name=out.name)
summary(Bout)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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