Biocview "Epigenetics"

A DNA methylation classifier tool for the identification of pediatric brain tumor subtypes
A DNA methylation classifier tool for the identification of pediatric brain tumor subtypes
A DNA methylation classifier tool for the identification of pediatric brain tumor subtypes
A GAM based framework for analysis of ChIP-Seq data
A GAM based framework for analysis of ChIP-Seq data
A GAM based framework for analysis of ChIP-Seq data
Analyze Illumina Infinium DNA methylation arrays
Analyze Illumina Infinium DNA methylation arrays
Analyze Illumina Infinium DNA methylation arrays
An R package to detect chromatin state switches from epigenomic data
An R package to detect chromatin state switches from epigenomic data
An R package to detect chromatin state switches from epigenomic data
Assess epigenetic heterogeneity with proportion of intermediate methylation
Assess epigenetic heterogeneity with proportion of intermediate methylation
BEAT - BS-Seq Epimutation Analysis Toolkit
BEAT - BS-Seq Epimutation Analysis Toolkit
Binomial test for Hi-C data analysis
Binomial test for Hi-C data analysis
Bump Hunter
Bump Hunter
Bump Hunter
Bump Hunter
CHiCAGO: Capture Hi-C Analysis of Genomic Organization
CHiCAGO: Capture Hi-C Analysis of Genomic Organization
ChIP-Seq data scaling according to spike-in control
Companion package to chipenrich
CpG Island Analysis Pipeline for Illumina Methylation Array and Targeted BS-Seq Data
CpG Island Analysis Pipeline for Illumina Methylation Array and Targeted BS-Seq Data
CpG Island Analysis Pipeline for Illumina Methylation Array and Targeted BS-Seq Data
Cross omic genetic fingerprinting
Data preprocessing and quality control for Illumina HumanMethylation450 and MethylationEPIC BeadChip
Data preprocessing and quality control for Illumina HumanMethylation450 and MethylationEPIC BeadChip
DeepBlueR
DeepBlueR
DeepBlueR
DeepBlueR
Detection and inference of differentially methylated regions from Whole Genome Bisulfite Sequencing
DynaMO predicts spatiotemporal binding of transcription factors
Epigenetic Dissection of Intra-Sample-Heterogeneity
Epigenetic Dissection of Intra-Sample-Heterogeneity
Exposome and omic data associatin and integration analysis
Gene Set Enrichment For ChIP-seq Peak Data
Gene Set Enrichment For ChIP-seq Peak Data
Imputation-guided re-construction of complete methylomes from WGBS data
Imputation-guided re-construction of complete methylomes from WGBS data
Imputation-guided re-construction of complete methylomes from WGBS data
Integrative Analysis and Visualization of Epigenomic Sequencing Data
Integrative Analysis and Visualization of Epigenomic Sequencing Data
Integrative Statistics of alleLe Dependent Expression
Integrative Statistics of alleLe Dependent Expression
Methylation-Based Inference of Regulatory Activity
Methylation-Based Inference of Regulatory Activity
Model higher-order methylation profiles
Model higher-order methylation profiles
Model higher-order methylation profiles
Model higher-order methylation profiles
msgbsR: methylation sensitive genotyping by sequencing (MS-GBS) R functions
msgbsR: methylation sensitive genotyping by sequencing (MS-GBS) R functions
msgbsR: methylation sensitive genotyping by sequencing (MS-GBS) R functions
Permutation-Based Analysis associating Conserved Differentially Methylated Elements from One Generation to the Next to a Treatment Effect
Permutation-Based Analysis associating Conserved Differentially Methylated Elements from One Generation to the Next to a Treatment Effect
Prediction of chromatin looping interactions from ChIP-seq and sequence motifs
Prediction of gestational age with Illumina HumanMethylation450 data
Prediction of gestational age with Illumina HumanMethylation450 data
Prediction of gestational age with Illumina HumanMethylation450 data
Prediction of gestational age with Illumina HumanMethylation450 data
Repetitive Element Methylation Prediction
Repetitive Element Methylation Prediction
Repetitive Element Methylation Prediction
RnBeads
RnBeads
Simulating Whole-Genome Inherited Bisulphite Sequencing Data
Simulating Whole-Genome Inherited Bisulphite Sequencing Data
Simulating Whole-Genome Inherited Bisulphite Sequencing Data
StatePaintR: a tool for creating and documenting reproducible chromatin state annotations from StateHub
StatePaintR: a tool for creating and documenting reproducible chromatin state annotations from StateHub
TCGA Workflow Analyze cancer genomics and epigenomics data using Bioconductor packages
TCGA Workflow Analyze cancer genomics and epigenomics data using Bioconductor packages
Time course sequencing data analysis
Time course sequencing data analysis
Time course sequencing data analysis